Gene Catalogue of Chromosome 21 (May 2000) :

Gene symbol	Accession No.	Description	Category	Strand	Position 1	Position 2	Gene size	Genomic clone (s)
TPTE	AF007118	tensin, putative protein-tyrosine phosphatase, EC 3.1.3.48.	1.1	-	425	84293	83869	B15L0C0 B7L1C4
CYC1LP4		cytochrome c pseudogene	5	-	29708	29866	159	B15L0C0
Pseudo1		putative zinc finger protein pseudogene	5	-	91247	143054	51808	B7L1C4 R589M2 B11L7C8 pT171-pS39
PRED1		putative gene, protein kinase C ETA type (EC 2.7.1.) like	3.2	-	241159	241231	73	B11L7C8 pT171-pS39
ORLP1		pheromone receptor pseudogene	5	-	246824	248023	1200	B11L7C8 pT171-pS39
Pseudo1.1		pseudogene similar to cDNA DKFZp586E1423	5	+	198028	198744	717	B7L1C4 R589M2 B11L7C8 pT171-pS39
Pseudo2		tubulin tyrosine ligase-like 1 pseudogene	5	+	207391	207760	370	B11L7C8 pT171-pS39
EIF3S5P		eucaryotic initiation factor-3, subunit 5 pseudogene	5	+	273760	274805	1046	pT171-pS39
Centromere
PRED65		putative gene with similarity to zinc finger proteins	2.2	-	130521	147341	16821	P133G21
PRED3		putative gene, proto-oncogene protein precursor like	3.1	+	383460	384843	1384	P16C2
PRED4		putative gene with similarities to KIAA1074 and KIAA0565	3.2	-	418462	422157	3696	P16C2 CIT62L20
ORLP2		pheromone receptor pseudogene	5	+	510692	511506	815	CIT62L20 P879G12 P29H4
CNN2P		calponin P pseudogene	5	+	863250	865367	2118	P256M13
C21orf15		spliced EST AJ003450	4.2	-	879683	881808	2126	P256M13
CYP4F3LP		cytochrome P450 pseudogene	5	-	883308	884305	998	P256M13
NF1L1P		neurofibromatosis type 1 pseudogene	5	+	1035710	1043391	7682	B585O4
PRED5		putative gene, lipase (EC 3.1.1.3) like	3.1	-	1218308	1225969	7662	P98L15
RBM11		putative gene, RNA binding motif protein 11 like	3.1	+	1252617	1263937	11321	P98L15 P90B5
PRED6		putative gene, multidrug resistance associated protein like	3.1	+	1310494	1336235	25742	P98L15 P90B5
STCH	U04735	human microsomal stress 70 protein ATPase core	1.1	-	1409391	1419705	10315	P90B5 P126N20
SAMSN-1		gene with homology to KIAA0790 protein	1.2	-	1521779	1582895	61117	P31B5 CIT39I12
POLR2CP		pseudogene similar to RNA polymerase H subunits	5	+	1794171	1795794	1624	P153I22
NRIP1	X84373	nuclear factor RIP140	1.1	-	1997831	2005069	7239	P30P13 P270M7
CYC1LP5		cytochrome C pseudogene	5	-	2527156	2527393	238	P75G13 P265A22
RAD23BLP		UV excision repair protein pseudogene	5	-	2730926	2732615	1690	P111K10
USP25	AF170562	ubiquitin specific protease USP25	1.1	+	2766805	2915540	148736	P111K10 P73M5 P135E14
RBPMSLP		RNA-binding protein hermes pseudogene	5	-	2780633	2780945	313	P111K10 P73M5
C21orf34		spliced EST AA451643	4.1	+	3107948	3267833	159886	R746N6 R783C3 R649M24
VDAC2P		voltage-dependent anion channel isoform 2 pseudogene	5	+	3131006	3132089	1084	R746N6 R783C3
C21orf35		spliced EST AW242517	4.1	+	3524206	3643847	119642	R821P16 R291N6
C21orf36		spliced EST AA017197	4.2	-	3655580	3655996	417	R291N6
C21orf37		spliced EST N47348	4.2	+	4475612	4485648	10037	R651M22
CXADR	U90716/Y07593	46 kD coxsackievirus and adenovirus receptor (CAR) protein	1.1	+	4549799	4603690	53892	R827P19 R877L16
BTG3	D64110	B-cell translocation gene	1.1	-	4630458	4649509	19052	R877L16 R396A17
YG81	AF239726	gene of unknown function, spliced variant EST AI126619	1.1	-	4829991	4856082	26092	P14F16 pT1545
C21orf39		spliced EST T74237	4.2	-	4872415	4922351	49937	pT1545 R546A20
RL37P		human ribosomal protein L37 pseudogene	5	+	4930891	4931234	344	R546A20
PRED12		putative gene, membrane protein like	3.1	+	5293260	5297043	3784	P37H21
PRSS7	U09860	human enterokinase; EC 3.4.21.9.	1.1	-	5306124	5440407	134284	P37H21 R153P3 R107N17
SLC6A6P		taurine transporter processed pseudogene	5	+	6281763	6283565	1803	R697D18
RL37P2		human ribosomal protein L37 pseudogene	5	+	6631155	6631371	217	R330A3
C1QBPP		human splicing factor 2 hyaluronic acid-binding protein (SF2p32) pseudogene	5	+	6796358	6797194	837	R753B2
C21orf40		spliced EST AA412132	4.2	+	6930543 >	6937020 >	6478	R335N5
FDPSP		farnesyl pyrophosphate synthetase processed pseudogene	5	+	7425582	7426142	561	R66B12 R292N6
KRT18P2		cytokeratin 18 processed pseudogene	5	+	7462183	7463505	1323	R66B12 R292N6
RPS3AP		ribosomal protein S3 processed pseudogene	5	+	7467697	7468061	365	R66B12 R292N6
PRED14		human cDNA clone 280692	1.2	-	7780231	7780656	426	R47C12 R781M3
PPIAP		cyclophilin-related processed pseudogene	5	+	7865216	7865974	759	R781M3
NCAM2	U75330	neural cell adhesion molecule 2 precursor	1.1	+	8232569	8490122	257554	R636L7 R812P3 R629B19 21B42C4
PRED15		exon prediction only	4.3	+	8576553	8706382	129830	R780G18 R242B2 R44J6
PRED16		spliced EST AI188136	4.1	+	9064811	9066584	1774	R745D19
Pseudo3		ETS-like processed pseudogene	5	+	9117241	9118467	1227	R745D19
Pseudo4		ERK3 protein kinase pseudogene	5	+	9385099	9388953	3855	R697O17
ZNF299P		zinc finger-like processed pseudogene	5	+	10039861	10041328	1468	R677J23
EEF1A1P		human elongation factor EF-1-alpha processed pseudogene	5	+	10340314	10341348	1035	R42M17
TUBAP		alpha tubulin (TUBA2) processed pseudogene	5	+	10357546	10359276	1731	R42M17
C21orf53		spliced EST W73844	4.2	-	10936167	10938194	2028	P494A8
RPL13AP		ribosomal protein RPL13A pseudogene	5	+	12311851	12312521	671	CTD2289H10
C21orf42		spliced EST AA442272	4.1	-	12370760	12380055	9296	CTD2291C14
PRED21		spliced EST AI016585	4.2	-	12532814	12535145	2332	pS11
PRED66		spliced EST N23422	4.1	+	12535700	12549916	14217	pS11
PRED22	AK000458	complete cDNA FLJ20451	1.2	-	12535700	12557525	21826	pS11
C21orf43		gene similar to mouse junctional adhesion molecule, spliced EST AA725566	2.1	-	12633927	12664967	31041	f30F8 pT172
FDXP2		adrenodoxin pseudogene	5	+	12641719	12643723	2005	f30F8
ATP5A	M37104	human mitochondrial ATPase coupling factor 6 subunit	1.1	-	12674543	12684464	9922	pT172
GABPA	U13044, D13318	human nuclear respiratory factor-2 subunit alpha	1.1	+	12685464	12719695	34232	pT172
APP	Y00264	human mRNA for amyloid A4 precursor of Alzheimer's disease	1.1	-	12830594	13120880	290287	pT364 pT1715 pS491 pT1559 pS459 KB580H10 Q22F1
PRED24		gene similar to MARCKS, cDNA DKFZp564P1664	2.1	-	13177819	13184351	6533	Q22F1 pR44F3 KB1622E1
ADAMTS1	AF170084	human metalloproteinase with thrombospondin type 1 motifs	1.1	-	13786471	13795380	8910	KB2043D3 KB126A3
ADAMTS5	NM_007038	disintegrin-like and metalloprotease with thrombospondin type 1 motif, 5	1.1	-	13871628	13916697	45070	KB45E1 KB1346F10
GPXP2		human glutathione peroxidase (GPXP2) pseudogene	5	-	14093307	14094251	945	KB1411F11
PRED25		exon prediction only	4.3	+	14203290	14213276	9987	KB1411F11 KB1648B8
EIF4A1P		eukaryotic initiation factor 4AI pseudogene	5	-	14317196	14318136	941	KB1648B8
RPL10P		60S ribosomal protein L10 pseudogene	5	-	14370507	14371248	742	KB1648B8 KB1987H1
PRED26		exon prediction only	4.3	-	14408249	14439794	31546	KB1987H1
D21S2073		KIAA0253 pseudogene	5	+	14442321	14443123	803	KB1987H1
C21orf23		spliced EST AI796012	4.2	+	14672563	14701383	28821	KB851D4 KB1919E1
PRED27		exon prediction only	4.3	-	14751587	14796251	44665	KB1919E1 P50G11
PRED28	AF139682	putative N6-DNA-methyltransferase	1.2	-	15826382	15835617	9236	P273B14 P886H8
HSPDP7		human chaperonin pseudogene	5	-	15837255	15839603	2349	P273B14 P866H8
ZNF294	AB018257	human mRNA for KIAA0714 protein	1.2	-	15878401	15943199	64799	P866H8 P100J12
RPL23P2		60S ribosomal protein L23 pseudogene	5	-	15947825	15948301	477	P100J12
C21orf6		chromosome 21 open reading frame 6	1.1	-	15958389	15969612	11224	P100J12
USP16	AF126736	human ubiquitin processing protease, EC 3.1.2.15.	1.1	+	15974947	16004744	29798	P100J12 P79E4
CCT8	D13627	T-complex protein 1, theta subunit	1.1	-	16006583	16022451	15869	P100J12 P79E4
C21orf7		putative gene, TGF-beta-activated kinase like	3.1	+	16079612	16123711	44100	P79E4 P84N21
GAPDP14		glycerinaldehyde-3-phosphate dehydrogenase pseudogene	5	+	16171147	16172079	933	P84N21
BACH1	A20292	transcription regulator protein	1.1	+	16247722	16294818	47097	P292A20
C21orf12	R82144	spliced EST R82144 (trapped exon)	4.2	-	16318856	16320063	1208	R175P11
C21orf8	AA843704	spliced EST AA843704	4.1	-	16444917	16449219	4303	R175P11
GRIK1	L19058	human glutamate receptor (GLUR5)	1.1	-	16502382	16888900	386519	R32A2 c103A0552 R313P22 R269P7 295E05-A R355D16 P209L12
C21orf41		spliced EST N45393	4.1	+	16545371	16546534	1164	R32A2 c103A0552
C21orf9		spliced EST W58369, nuclear factor	4.2	+	16697787	16712843	15057	R269P7 295E05-A
CLDN17	AJ250712	human CLDN17 gene for claudin-17	1.1	-	17114968	17115642	675	R463J19
CLDN8	AJ250711	human CLDN8 gene for claudin-8	1.1	-	17163042	17164972	1931	R463J19
PRED29		exon prediction only	4.3	+	17735491	17830550	95060	R282I5
PRED30		exon prediction only	4.3	+	17840954	17920802	79849	R282I5 R14B21
UBE3AP2		ubiquitin protein ligase, processed pseudogene	5	-	18009007	18012195	3189	R14B21
TIAM1	U16296	human T-lymphoma invasion and metastasis inducing TIAM1 protein	1.1	-	18069188	18507997	438810	R137B7 PAC871G18 R289H18 R762O15 PQ8P9 pT1040 pS158
PRED31		exon prediction only	4.3	+	18401762	18453510	51749	PQ8P9 pT1040
BTRC2P		pseudogene similar to BTRC	5	+	18576377	18577510	1134	pT650
SOD1	X02317	Cu/Zn superoxide dismutase, EC 1.15.1.1.	1.1	+	18608676	18617893	9218	pS552 pS322
rA4	AF023142		1.1	-	18619970	18650793	30824	pS322 pPQ119B8
HMG14P		nonhistone chromosomal protein HMG-14 pseudogene	5	+	18655577	18656152	576	pPQ119B8
PRED33		putative serine threonin kinase, homolog to mouse MAK5 AF055919	1.1	+	18822262	18953011	130750	pQ78C10 pS594 pQ89A6 c32D2-c64E11 pS306
C21orf44		spliced EST AW138869	4.2	-	19029258	19035242	5985	pD5
C21orf45		spliced EST AI369385	4.1	-	19217960	19227693	9734	pT255
KIAA0539	AB011111	human mRNA for KIAA0539 protein	1.2	-	19259964	19290570	30607	pT255 c64B11 pD1
PRED34		putative gene, similar to C. elegans P91865, spliced EST H51862	3.2	+	19402248	19464331	62084	pT293 fT1515 f74A4 f1G6
C21orf47		spliced EST H51284	4.2	-	19498020	19498436	417	pT1230
TCP10L		gene similar to TCP10, spliced ESTs AA465232/T18865	2.1	-	19531192	19552136	20945	pT1866
SYNJ1	AF009040	synaptojanin-1, polyphosphoinositide phosphatase	1.1	-	19577707	19649002	71296	pT1866 c55A9 c53D11 pPQ62G5
GCFC	AF153208	human GC-rich sequence DNA-binding factor candidate	1.1	-	19683781	19718831	35051	pT1082 pS12
C21orf49		spliced EST T19019	4.1	+	19721142	19737649	16508	pS12
PRED36		exon prediction only	4.3	+	19762548	19768318	5771	pS12
PRKCBP2	U48250	human protein kinase C-binding protein RACK17	1.1	+	19975790	19977861	2072	pQ77A10
C21orf54		spliced EST AA934973	4.2	-	20114481	20118775	4295	pQ14E2
IFNAR2	X77722	human interferon alpha/beta receptor	1.1	+	20179027	20211701	32675	pQ95D4 pQ20D3 pD5C10 pS318
IL10RB	Z17227	human transmembrane receptor protein; cytokine receptor	1.1	+	20215375	20246167	30793	pS318
IFNAR1	X60459	human interferon-alpha receptor (HuIFN-alpha-Rec)	1.1	+	20273930	20305504	31575	pD71A4 pD5C11 PQ38G8
IFNGR2	U05875	interferon-gamma receptor beta chain precursor	1.1	+	20351850	20386468	34619	PQ102G11 PPACB5
C21orf4	AF045606	chromosome 21 open reading frame 4 (Interferon receptor cluster)	1.2	-	20399658	20428899	29242	PPACB5 pD16B8 pS590
RPS5L	NM_001009	human ribosomal protein S5 mRNA, complete cds	1.1	+	20430493	20431180	688	pS590
C21orf55		spliced ESTs AA233864/AA232809	4.2	+	20434484	20437154	2671	pS590
GART	X54199	phosphoribosylglycinamide formyltransferase, EC 2.1.2.2.	1.1	-	20452917	20491053	38137	pS590 pT604
C21orf50		spliced EST AA658915	4.1	+	20492026	20498551	6526	pT604
SON	X63753	SON DNA-binding protein, KIAA1019	1.1	+	20499844	20526435	26592	pT604 pT377
CRYZL1	AF029689	human quinone oxidoreductase homolog-1	1.1	-	20538571	20590675	52105	pT377 PPQ786 f90A8 f6C7 pT1276
ITSN	AF064243/4	human intersectin-SH3 domain-containing protein SH3P17	1.1	+	20743325	20787448	44124	P130N6 P201F12
ATP5O	X83218	human ATP synthase OSCP subunit, oligomycin sensitivity conferring protein	1.1	-	20852405	20864736	12332	P149C3
SLC5A3	AF027153	human solute carrier family 5, member 3, Sodium/myo-inositol cotransporter	1.1	+	21022392	21053127	30736	R338L7 CTD2344F14
PRED37		exon prediction only	4.3	+	21110621	21153303	42683	CTD2344F14 pS185 P245P17
KCNE2	AF071002	human minK-related peptide 1, potassium channel subunit, MiRP1	1.1	+	21319354	21320085	732	pQ12C8
C21orf51		spliced EST AA306264	4.1	+	21328376	21337646	9271	pQ82F5
PRED38		exon prediction only	4.3	+	21368165	21392696	24532	pQ97G8 pQ45D2
KCNE1	L28168	human cardiac delayed rectifier potassium channel protein	1.1	-	21398192	21398599	408	PPQ336B18
DSCR1	U28833	human Down syndrome candidate region protein, proline-rich protein	1.1	-	21465436	21562791	97356	PPQ125H6 PPQ31L12
PRED39		exon prediction only	4.3	+	21498407	21524010	25604	PPQ125H6
CLIC1L		putative gene, p64 chloride channel like, spliced ESTs T92523/T91760	3.1	+	21657652	21665430	7779	PPQ140K16
C21orf52		spliced EST AI761253	4.1	-	21672754	21682989	10236	PPQ140K16
RUNX1	D43967	acute myeloid leukemia 1 protein (oncogene AML-1), core-binding factor, alpha subunit	1.1	-	21770223	21837636	67414	PPQ140K16 PPQ122C7-P499A22
RPL34P3		pseudogene with similarity to ribosomal protein L34	5	-	22421026	22421405	380	P220P20
RPS20P		pseudogene with similarity to ribosomal protein S20	5	-	22673718	22674176	459	P169K17
PPP1R2P2		protein phosphatase inhibitor 2 pseudogene	5	+	22836211	22837448	1238	c102A0977 c103C0352
PRED40		exon prediction only	4.3	+	22853397	22921398	68002	c103C0352 KB29E1 Q98A3 P27A22
RPL23AP3		ribosomal protein L23A pseudogene	5	+	22965074	22965610	537	P27A22
C21orf18		spliced EST AK001660	1.2	-	22983591	23009434	25844	P27A22
RIMKLP		pseudogene for KIAA1238 protein, similar to bacterial ribosomal S6 modification protein	5	+	22999209	23001048	1839	P27A22
C21orf27		spliced EST AI685287	4.2	+	23009481	23013468	3988	P27A22
CBR1	J04056	carbonyl reductase (NADPH) 1, EC 1.1.1.184.	1.1	+	23019072	23022213	3142	P27A22
C21orf19		unspliced ORF	5	+	23079121	23080959	1839	KB795B7
RPS9P		ribosomal protein S9 pseudogene	5	+	23081472	23082155	684	KB795B7
CBR3	AB004854	carbonyl reductase (NADPH) 3, EC 1.1.1.184.	1.1	+	23084242	23095605	11364	KB795B7
C21orf5	AJ237839	chromosome 21 open reading frame 5	1.1	+	23113590	23345278	231689	KB795B7 KUD22G7 Q78B1 P24J14 KB739C11 KB5G11
RPL3P		ribosomal protein L3 pseudogene	5	-	23117970	23119234	1265	KB795B7
SFRS9P1		splicing factor pseudogene	5	-	23243581	23244505	925	P24J14
RPS26P		ribosomal protein S26 pseudogene	5	-	23252636	23252753	118	P24J14
KIAA0136		human mRNA for KIAA0136 protein	1.1	+	23268980	23325388	56408	P24J14 KB739C11
CHAF1B	U20980	human chromatin assembly factor-I p60 subunit	1.1	+	23334828	23365571	30744	KB5G11
ATP5J2LP		F1Fo-ATPase synthase f subunit pseudogene	5	-	23337504	23337939	436	KB5G11
CLDN14	AJ132445	human CLDN14 gene	1.2	-	23409717	23410436	720	KB5G11 KB176G8
PSMD4P		proteasome 26S subunit pseudogene	5	-	23434597	23436159	1563	KB176G8
PRED41		exon prediction only	4.3	+	23498096	23503146	5051	KB176G8 KB1572B10
SIM2	U80456	human transcription factor SIM2, homolog of the Drosophila single-minded gene SIM1	1.1	+	23648420	23698647	50228	KB594G10
HLCS	D87328	holocarboxylase synthetase, EC 6.3.4.	1.1	-	23699922	23910899	210978	KB594G10 KUD8F6 KUD66G11 Q2F5 Q41G5 Q63D8 KUD37D12 pD47 KB318C2
DSCR5	AF216305	human Down syndrome critical region protein C	1.1	-	24014111	24021810	7700	KB318C2 pT486 pT1492
TTC3	D84294	tetratricopeptide repeat protein 3 (TPR repeat protein D)	1.1	+	24034533	24151928	117396	pT1212 pT1601
DSCR3	D87343	Down syndrome critical region protein A	1.1	-	24172248	24216356	44109	pT1601 pD10
DYRK1A	D86550	dual-specificity tyrosine-Y-phosphorylation regulated kinase, EC 2.7.1.	1.1	+	24367732	24464002	96271	pT1091 pD26 pS165
KCNJ6	U24660	human G protein coupled inward rectifier potassium channel 2 (hiGIRK2)	1.1	-	24573396	24864896	291501	c10C6 pT556 pD34 pT1435 c35A12 c82A12 pS253 pT2062 pS611
DSCR4	AB000099	Down syndrome critical region protein B	1.1	-	25002841	25069979	67139	c7A4 PCR-A4H11 c63H11 pD40
KCNJ15	Y10745	inwardly rectifing potassium channel Kir4.2.	1.1	+	25245362	25249289	3928	pT695 pS166
ERG	M17254	transcriptional regulator ERG (transforming protein ERG)	1.1	+	25330315	25609026	278712	pS166 pS230 pS479 KB1266F4 KB2042G5 P178O22
C21orf24		spliced EST AI492145	4.2	-	25687390	25689416	2027	P178O22 Q78A2
ETS2	J04102	human erythroblastosis virus oncogene homolog 2	1.1	+	25754197	25771822	17626	Q109A8 KUD94C10
RPL23AP5		60S ribosomal protein pseudogene	5	+	26075948	26076486	539	P141B3
PCBP2P1		heteronucleotide ribosomal protein pseudogene	5	+	26119393	26120517	1125	P141B3 P31K18
DSCR2	AJ006291	leucine rich protein C21-LRP	1.2	-	26123847	26131838	7992	P141B3 P31K18
N143	AJ002572	human mRNA; transcriptional unit N143	1.1	-	26142249	26143447	1199	P31K18
WDR9		gene homolog to cAMP response element binding and beta-tranducin family	1.2	-	26144078	26260855	116778	P31K18 P128M19
HMG14	J02621	human non-histone chromosomal protein HMG-14	1.1	-	26289611	26296346	6736	P128M19
WRB	Y12478	tryptophan-rich protein, congenital heart disease 5 protein	1.2	+	26325991	26343350	17360	P128M19
C21orf13		hypothetical 76.5 kD protein, O95447, myosin heavy chain and kinesin homology	3.1	-	26350852	26389850	38999	P128M19 P1031P17
SH3BGR	X93498	21-Glutamic Acid-Rich Protein (21-GARP)	1.1	+	26397539	26461157	63619	P1031P17 P160L9 P70I24
B3GALT5	AB020337	GlcNAc-beta-1,3-galactosyltransferase 5	1.1	+	26602223	26607784	5562	P70I24
IGSF5		putative gene, immunoglobulin superfamily 5 like	3.1	+	26710455	26737020	26566	P206A10 BAC-291B3
PCP4	U52969	brain specific polypeptide PEP19	1.1	+	26812439	26874378	61940	BAC-291B3
DSCAM	AF023450	human CHD2-52 down syndrome cell adhesion molecule	1.1	-	26958276	27791902	833627	P31P10 P58D10 P267O10 P171F15 P111A18 P270B2 P21L13 P198E8 P39C17
PRED42		exon prediction only	4.3	+	28069946	28098280	28335	P146B4 P141D16
BACE2	AF050171	beta-site APP-cleaving enzyme 2, EC 3.4.23.	1.1	+	28113408	28221077	107670	P141D16 P269A14 P265B9
PRED43		exon prediction only	4.3	-	28124674	28131593	6920	P141D16 P269A14
PRED44		putative gene containing transmembrane domain	3.1	+	28249038	28271985	22948	P265B9
C21orf11		gene similar to 2-19 protein	2.1	+	28283696	28302461	18766	P265B9
MX2	M30818	human interferon-regulated resistance GTP-binding protein MXB	1.1	+	28307287	28354211	46925	P265B9 KB447A5
MX1	NM_002462	human interferon-regulated resistance GTP-binding protein MXA	1.1	+	28371509	28404533	33025	KB447A5 Q25D2 Q87D5
TMPRSS2	U75329	transmembrane protease, serine 2, EC 3.4.21.	1.1	-	28410553	28443714	33162	Q87D5 KB447A5 CIT2533B8
C21orf20		spliced EST AW138631	4.2	-	28504635	28508473	3839	CIT2533B8
C21orf21		spliced EST AA969880	4.2	+	28638264	28656298	18035	KB2042A8 KB657H6
C21orf22		spliced EST AA435939	4.2	+	28675954	28676550	597	KB657H6
ANKRD3		putative gene, ankirin like, possible dual-specificity Ser/Thr/Tyr kinase domain	3.1	-	28698345	28726003	27659	KB657H6 KB1334E11
ZNF298		putative gene containing C2 domain, spliced EST AA490433	3.1	-	28802792	28846674	43883	f112J21 KB1454G8 KB1016E7
C21orf25		human cDNA DKFZp586F0422, AL050173	1.2	-	28852545	28921083	68539	KB1016E7
ZNF295		gene similar to zinc finger 5 protein	2.1	-	28954266	28977792	23527	KB1016E7 KB834A1
UMODL1		gene similar to uromodulin	2.1	+	29043525	29105067	61543	KB834A1 KB1342D7
PRED46		exon prediction only	4.3	+	29133888	29143382	9495	KB1342D7 KB1430A10
ABCG1	X91249	white protein homolog (ATP-binding cassette transporter 8)	1.1	+	29186705	29264680	77976	KB1430A10 KB169B4
TFF3	L08044	trefoil factor 3, HITF, human intestinal trefoil factor	1.1	-	29279510	29282789	3280	KB169B4
TFF2	X51698	trefoil factor 2, SML1, human spasmolytic polypeptide (SP)	1.1	-	29313816	29318396	4581	KB169B4
TFF1	X00474	trefoil factor, BCE1, human pS2 induced by estrogen from human breast cancer cell line MCF-7	1.1	-	29329717	29333970	4254	KB169B4
TMPRSS3		gene similar to transmembrane serine protease	2.1	-	29339326	29363526	24201	KB169B4
UBASH3A		gene similar to UBA containing SH3 domain	2.1	+	29371350	29415100	43751	KB169B4 KB994G8
TSGA2		human homolog to mouse testis specific gene 2	1.2	-	29439932	29463727	23796	KB994G8 KB907F12
SLC37A1		gene similar to glycerol-3-phosphate permease	2.1	+	29463525	29549761	86237	KB994G8 KB907F12 KB1559F8
PDE9A	AF067223	CGMP-specific 3',5'-cyclic phosphodiesterase type 9, EC 3.1.4.17.	1.1	+	29621249	29742945	121697	KB1559F8 KB161B8 KB51A8
WDR4		WD repeat domain 4	1.2	-	29816661	29846963	30303	KB51A8 KB1405B7
NDUFV3	X99726/7/8	NADH-ubiquinone oxidoreductase 9 kD subunit precursor, EC 1.6.5.3.	1.1	+	29860728	29876602	15875	KB1405B7
PKNOX1	U68727	human homeobox-containing protein	1.1	+	29971758	29999360	27603	KB1151C12
CBS	L00972	human cystathionine-beta-synthase, EC 4.2.1.22.	1.1	-	30020629	30035840	15212	KB1151C12 KB2007G4
U2AF1	M96982	human U2 snRNP auxiliary factor small subunit	1.1	-	30060393	30074960	14568	KB2007G4
CRYAA	U05569	human alphaA-crystallin (CRYA1)	1.1	+	30136479	30140239	3761	KB2007G4
HSF2BP	AB007131	heat shock transcription factor 2 binding protein	1.1	-	30249766	30458464	208699	KB953G5
PRED47		exon prediction only	4.3	+	30278845	30283667	4823	KB43F12
PRED48		exon prediction only	4.3	-	30290587	30396599	106013	KB43F12 KUD45D10 KB1216G2
SNF1LK		gene similar to rat protein kinase (KID2)	2.1	-	30346014	30355450	9437	KB43F12 KUD45D10
PRED49		exon prediction only	4.3	-	30373833	30390064	16232	KUD45D10 KB1216G2
PRED50		exon prediction only	4.3	+	30394045	30424807	30763	KB1216G2 KUD41H11 KB953G5
PRED51		exon prediction only	4.3	-	30427539	30435071	7533	KUD41H11 KB953G5
RPL31P		ribosomal protein L31 pseudogene	5	+	30480511	30480915	405	KB953G5
H2BFS	AB041017	H2B histone family S member	1.1	+	30494512	30494892	381	KB953G5 KB161B12
KIAA0179	D80001	human mRNA for KIAA0179 protein	1.2	+	30588872	30625350	36479	KB22A5
PDXK	U89606	human pyridoxal kinase, EC 2.7.1.35.	1.1	+	30648562	30685351	36790	KB22A5
CSTB	L03558	cystatin B (liver thiol proteinase inhibitor)	1.1	-	30703222	30705637	2416	KB836E9
D21S2056E	U79775	human NNP-1/Nop52 (NNP-1), novel nuclear protein 1	1.1	+	30718866	30733378	14513	KB836E9
PRED52		exon prediction only	4.3	+	30758662	30761538	2877	KB836E9
MYL6P		myosine alkali light chain 6 pseudogene	5	-	30785002	30785646	645	KB836E9
AGPAT3		gene similar to plant lysophosphatidic acid acyltransferase	2.1	+	30833164	30911690	78527
TMEM1	U19252	epilepsy holoprosencephaly candidate-1 protein	1.2	+	30941630	31034013	92384	KB218C10 KB86A5 KUD6B5
H2AFZP		histone H2AZ pseudogene	5	-	30975252	30976418	1167	KB86A5
PWP2H	X95263	periodic tryptophan protein 2 homolog	1.1	+	31036667	31060455	23789	KB86A5 KUD6B5
C21orf33	Y07572	human HES1 protein, homolog to E.coli and zebrafish ES1 protein	1.2	+	31062955	31074982	12028	KUD6B5 KUD11C9
C21orf32		putative gene with similarities to yeast gene YDL038c	3.2	-	31097059	31103123	6065	KUD11C9 KUD1G8
KIAA0653	AB014553	human mRNA for KIAA0653 protein	1.2	-	31156109	31170220	14112	KUD9G11 KUD28B11
DNMT3L	AF194032	human cytosine-5-methyltransferase 3-like protein	1.2	-	31175615	31191491	15877	KUD28B11 KUD4G11
AIRE	Z97990	autoimmune regulator (APECED protein)	1.1	+	31215162	31227494	12333	KUD4G11
PFKL	X15573	human liver-type 1-phosphofructokinase, EC 2.7.1.11.	1.1	+	31229326	31256648	27323	KUD4G11 KUD6A4 Q5B10
C21orf2	Y11392	nuclear encoded mitochondrial protein, cDNA A2-YF5	1.2	-	31258219	31268538	10320	Q5B10
TRPC7	AB001535	transient receptor potential-related channel 7, a novel putative Ca2+ channel protein	1.1	+	31282531	31372356	89826	KUD99F9 KUD107C4 KB68A7
C21orf30		intronless long ORF, AL117578	1.2	+	31389206	31472069	82864	KB68A7 KUD11H9 KB1399C7
C21orf29		spliced partial mRNA	4.2	-	31428574	31440450	11877	KB68A7 KUD11H9
C21orf31		spliced EST AJ003549/AJ003550/AJ003554	4.2	+	31436198	31445047	8850	KB68A7 KUD11H9 KB1399C7
PRED53		exon prediction only	4.3	-	31451158	31463198	12041	KUD11H9 KB1399C7
KAPcluster		keratin associated proteins, gene cluster	see text	see text	31468577	31632094	163518	KB1399C7 P314N7 P225L15
IMMTP		motorprotein pseudogene	5	-	31604873	31607494	2622	P314N7
UBE2G2	AF032456	human ubiquitin conjugating enzyme G2	1.1	-	31698366	31731118	32753	P225L15
SMT3H1	X99584	ubiquitin-like protein, a human homolog of the S. cerevisiae SMT3 gene	1.1	-	31734951	31747380	12430	P225L15 BAC-7B7
C21orf1	Z50022	putative surface glycoprotein C21orf1 precursor	1.1	-	31778924	31803008	24085	BAC-7B7
ITGB2	M15395	cell surface adhesion glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)	1.1	-	31815297	31850215	34919	BAC-7B7 Q15C24
PRED54		exon prediction only	4.3	-	31860690	31864574	3885	Q15C24 Q1C16
PRED55		exon prediction only	4.3	-	31875594	31889131	13538	Q1C16
PRED56		exon prediction only	4.3	+	31896344	31897138	795	Q1C16
ADARB1	U76421	human dsRNA adenosine deaminase DRADA2b, EC 3.5.	1.1	+	32003926	32155953	152028	R774F24 P1023B21 Q26C4
PRED57		exon prediction only	4.3	-	32021007	32024904	3898	R774F24 P1023B21
PRED58		exon prediction only	4.3	-	32030142	32044291	14150	R774F24 P1023B21
KIAA0958	AB023175	human mRNA for KIAA0958 protein	1.2	-	32193331	32217279	23949	P112E20
PRED59		exon prediction only	4.3	-	32273736	32281291	7556	P112E20 Q1L4
COL18A1	AF018081	human type XVIII collagen	1.1	+	32384934	32443158	58225	P310E12 BAC-53I10
SLC19A1	U19720	human reduced folate carrier (RFC)	1.1	-	32444153	32471866	27714	P310E12 BAC-53I10
PRED60		exon prediction only	4.3	-	32690004	32696445	6442	P101D8
PRED61		exon prediction only	4.3	-	32719718	32748256	28539	P101D8 Q11L5
PCBP3		poly (rC)-binding protein 3	2.1	+	32818086	32868160	50075	P75C10 PPQ624
PRED62		putative gene containing transmembrane domain	3.1	-	32856419	32858945	2527	PPQ624 c10365H12
COL6A1	X15880	human mRNA for collagen VI alpha-1 C-terminal globular domain	1.1	+	32926714	32931431	4718	f94F12
PRED63		exon prediction only	4.3	+	32949175	32994663	45489	f94F12 f25H12 R804K23
COL6A2	X15882	human mRNA for collagen VI alpha-2 C-terminal globular domain	1.1	+	33051649	33059229	7581	PP8G4
FTCD	U91541	human formiminotransferase cyclodeaminase, EC 4.3.1.4.	1.1	-	33062659	33081949	19291	PP8G4 f116A16 f133G20 21B35B20
C21orf56		spliced EST AA262598	4.1	-	33087542	33087825	284	21B35B20
LSS	D63807	human lanosterol synthase, EC 5.4.99.7.	1.1	-	33114827	33155144	40318	21B35B20 R178H12
MCM3	AB005543	human mRNA for MCM3 import factor	1.1	-	33161516	33211704	50189	R178H12 CTD2308H15
C21orf57		spliced EST AI702440	4.1	+	33217793	33224104	6312	CTD2308H15
C21orf58		spliced ESTs Z25278/AA825266	4.1	-	33227047	33244524	17478	CTD2308H15
PCNT	U52962	pericentrin, kendrin (KIAA0402)	1.1	+	33250559	33372115	121557	CTD2308H15 f50C10 f27E1 pS588 pT1957
KIAA0184	D80006	human mRNA for KIAA0184 protein	1.2	+	33468225	33511361	43137	pT1957 PP1D4
S100B	M59488	S-100 calcium-binding protein, beta chain	1.1	-	33524582	33525899	1318	PP9H11
HRMT1L1	X99209	protein arginine N-methyltransferase 2, EC 2.1.1.	1.1	+	33562032	33591323	29292	PP9H11 pT1136
RPL23AP4		ribosomal protein L23A pseudogene	5	+	33617159	33617631	473	f50F5